Your tests such as
http://tbb.st/1494080973874374355
http://tbb.st/1495068447724873855
All have indications that their is some contention on the connection, and in particular last week Virgin Media had a major issue with any sites linked to them via LINX
While the latency issues have been resolved it appears, it is highly probable that the path before it reaches our network is still congesting.
The new test is more sensitive to congestion, which is the whole point of running a speed test, i.e. to give people feedback on how a connection is performing. Some testers that exist are known to peak/burst speeds only, or give speeds beyond the actual connection speed.
The site change meant we went from the single thread been a custom protocol to plain old HTTP, and if a provider is having http issues then it might reflect that.
We can see other people with Virgin Media on the some browser getting 200 Mbps speeds (and look like that package based on upload) but with wide variations in the single thread.
Tester is certainly not broken e.g.
http://tbb.st/1494779969612608855
http://tbb.st/1494989676283855755
http://tbb.st/1495307612486934655
So given the known issues with Virgin Media and complaints that actually do mirror the performance our test is indicating happy to say the tester is working well.